Negative cofitness for Pf6N2E2_2573 from Pseudomonas fluorescens FW300-N2E2

RNA polymerase sigma factor for flagellar operon
SEED: RNA polymerase sigma factor for flagellar operon
KEGG: RNA polymerase sigma factor for flagellar operon FliA

Computing cofitness values with 388 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	Pf6N2E2_3508		Probable two-component response regulator	-0.81
2	Pf6N2E2_5692		Chemotaxis protein CheV (EC 2.7.3.-)	-0.74
3	Pf6N2E2_3827		FIG00955429: hypothetical protein	-0.69
4	Pf6N2E2_815		Signal transduction histidine kinase	-0.64
5	Pf6N2E2_3625		Flagellar motor rotation protein MotA	-0.63
6	Pf6N2E2_2612		O-antigen biosynthesis protein	-0.63
7	Pf6N2E2_3626		Predicted signal transduction protein	-0.62
8	Pf6N2E2_5874		TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins	-0.62
9	Pf6N2E2_2601		Flagellin protein FlaG	-0.61
10	Pf6N2E2_4351		Predicted signal transduction protein	-0.60
11	Pf6N2E2_4401		Glycine cleavage system transcriptional activator	-0.60
12	Pf6N2E2_2217		ATP-dependent Clp protease ATP-binding subunit ClpX	-0.59
13	Pf6N2E2_3624		Flagellar motor rotation protein MotB	-0.58
14	Pf6N2E2_5720		BarA sensory histidine kinase (= VarS = GacS)	-0.58
15	Pf6N2E2_2438		hypothetical protein	-0.58
16	Pf6N2E2_2329		diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	-0.58
17	Pf6N2E2_4616		type IV pilus biogenesis protein PilJ	-0.56
18	Pf6N2E2_5873		FIG00953467: hypothetical protein	-0.56
19	Pf6N2E2_2302		CAAX amino terminal protease family protein	-0.56
20	Pf6N2E2_4669		ElaA protein	-0.56

Or look for positive cofitness