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  • Negative cofitness for MMP_RS05225 from Methanococcus maripaludis S2

    RluA family pseudouridine synthase
    SEED: Similar to ribosomal large subunit pseudouridine synthase D, group RluD10
    KEGG: ribosomal large subunit pseudouridine synthase D

    Computing cofitness values with 700 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 MMP_RS03615 4Fe-4S binding protein -0.27
    2 MMP_RS03620 hypothetical protein -0.25
    3 MMP_RS04520 nucleoside deaminase -0.24
    4 MMP_RS04550 S-layer protein -0.24
    5 MMP_RS05000 FmdE family protein -0.22
    6 MMP_RS03090 cation:proton antiporter -0.22
    7 MMP_RS00150 AAA family ATPase -0.21
    8 MMP_RS08855 hypothetical protein -0.20
    9 MMP_RS08570 coenzyme F420-0:L-glutamate ligase -0.20
    10 MMP_RS05255 CBS domain-containing protein -0.19
    11 MMP_RS08225 RimK family alpha-L-glutamate ligase -0.19
    12 MMP_RS02730 ModD protein -0.19
    13 MMP_RS06550 AMP-binding protein -0.18
    14 MMP_RS06445 DUF89 domain-containing protein -0.18
    15 MMP_RS04845 CheF family chemotaxis protein -0.18
    16 MMP_RS02670 ATP-binding cassette domain-containing protein -0.18
    17 MMP_RS01300 hypothetical protein -0.18
    18 MMP_RS01775 TIGR00297 family protein -0.17
    19 MMP_RS07695 DUF3236 domain-containing protein -0.17
    20 MMP_RS02685 molybdate ABC transporter substrate-binding protein -0.17

    Or look for positive cofitness