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  • Negative cofitness for MMP_RS03220 from Methanococcus maripaludis S2

    RNA 2' 3'-cyclic phosphodiesterase
    SEED: 2'-5' RNA ligase
    KEGG: 2'-5' RNA ligase

    Computing cofitness values with 700 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 MMP_RS05295 minichromosome maintenance protein MCM -0.42
    2 MMP_RS06725 hypothetical protein -0.42
    3 MMP_RS05535 hypothetical protein -0.42
    4 MMP_RS04155 MFS transporter -0.40
    5 MMP_RS07695 DUF3236 domain-containing protein -0.39
    6 MMP_RS04850 UPF0254 family protein -0.39
    7 MMP_RS08855 hypothetical protein -0.39
    8 MMP_RS00730 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB -0.38
    9 MMP_RS00725 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC -0.38
    10 MMP_RS03080 universal stress protein -0.38
    11 MMP_RS01370 acetate--CoA ligase family protein -0.38
    12 MMP_RS00735 5 10-methenyltetrahydromethanopterin hydrogenase -0.37
    13 MMP_RS04510 ABC transporter permease subunit -0.37
    14 MMP_RS07115 MBL fold metallo-hydrolase -0.37
    15 MMP_RS09010 hypothetical protein -0.37
    16 MMP_RS06395 ThiF family adenylyltransferase -0.36
    17 MMP_RS01270 prepilin peptidase -0.36
    18 MMP_RS06435 CBS domain-containing protein -0.36
    19 MMP_RS07700 DUF1188 domain-containing protein -0.35
    20 MMP_RS07410 4-demethylwyosine synthase TYW1 -0.35

    Or look for positive cofitness