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  • Negative cofitness for HMPREF1078_RS19695 from Parabacteroides merdae CL09T00C40

    hypothetical protein
    SEED: Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor

    Computing cofitness values with 56 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 HMPREF1078_RS02385 recombinase family protein -0.62
    2 HMPREF1078_RS05520 transglutaminase-like domain-containing protein -0.62
    3 HMPREF1078_RS10615 C1 family peptidase -0.61
    4 HMPREF1078_RS12300 hypothetical protein -0.60
    5 HMPREF1078_RS16300 hypothetical protein -0.60
    6 HMPREF1078_RS18495 hypothetical protein -0.59
    7 HMPREF1078_RS11120 TatD family hydrolase -0.59
    8 HMPREF1078_RS06245 TIGR02757 family protein -0.59
    9 HMPREF1078_RS03110 ATP-binding protein -0.59
    10 HMPREF1078_RS09970 translation elongation factor 4 -0.58
    11 HMPREF1078_RS13590 cold shock domain-containing protein -0.58
    12 HMPREF1078_RS19955 hypothetical protein -0.58
    13 HMPREF1078_RS00110 saccharopine dehydrogenase family protein -0.58
    14 HMPREF1078_RS01340 flavin reductase family protein -0.56
    15 HMPREF1078_RS00970 hypothetical protein -0.56
    16 HMPREF1078_RS02375 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.56
    17 HMPREF1078_RS13325 PEP/pyruvate-binding domain-containing protein -0.56
    18 HMPREF1078_RS01630 YjbH domain-containing protein -0.55
    19 HMPREF1078_RS15340 ATP-binding cassette domain-containing protein -0.55
    20 HMPREF1078_RS03115 hypothetical protein -0.55

    Or look for positive cofitness