Negative cofitness for HMPREF1078_RS09985 from Parabacteroides merdae CL09T00C40

substrate-binding domain-containing protein
SEED: DNA-binding response regulator, AraC family

Computing cofitness values with 56 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	HMPREF1078_RS08015		helix-turn-helix domain-containing protein	-0.77
2	HMPREF1078_RS03110		ATP-binding protein	-0.75
3	HMPREF1078_RS03115		hypothetical protein	-0.75
4	HMPREF1078_RS11120		TatD family hydrolase	-0.74
5	HMPREF1078_RS05375		tRNA dihydrouridine synthase DusB	-0.73
6	HMPREF1078_RS10785		lysophospholipid acyltransferase family protein	-0.72
7	HMPREF1078_RS17200		glycoside hydrolase family 95 protein	-0.71
8	HMPREF1078_RS14070		alpha-glucan family phosphorylase	-0.71
9	HMPREF1078_RS10615		C1 family peptidase	-0.70
10	HMPREF1078_RS05345		peptidase U32 family protein	-0.69
11	HMPREF1078_RS09890		cation:proton antiporter	-0.69
12	HMPREF1078_RS01630		YjbH domain-containing protein	-0.69
13	HMPREF1078_RS12300		hypothetical protein	-0.69
14	HMPREF1078_RS10805		endonuclease/exonuclease/phosphatase family protein	-0.68
15	HMPREF1078_RS11480		TonB-dependent receptor	-0.68
16	HMPREF1078_RS10800		AraC family transcriptional regulator	-0.68
17	HMPREF1078_RS16325		nitrogen-fixing protein NifU	-0.67
18	HMPREF1078_RS09970		translation elongation factor 4	-0.67
19	HMPREF1078_RS02385		recombinase family protein	-0.67
20	HMPREF1078_RS13090		C1 family peptidase	-0.67

Or look for positive cofitness