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  • Negative cofitness for Psest_0090 from Pseudomonas stutzeri RCH2

    phosphonate metabolism protein PhnM
    SEED: Metal-dependent hydrolase involved in phosphonate metabolism
    KEGG: PhnM protein

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_4175 Flagellar motor switch/type III secretory pathway protein -0.42
    2 Psest_3981 hypothetical protein -0.36
    3 Psest_0804 hypothetical protein -0.36
    4 Psest_0167 Flagellar basal body-associated protein -0.36
    5 Psest_3969 3-hydroxyacyl-CoA dehydrogenase -0.35
    6 Psest_0342 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain -0.34
    7 Psest_0479 nudix-type nucleoside diphosphatase, YffH/AdpP family -0.33
    8 Psest_4347 PAS domain S-box -0.32
    9 Psest_3758 Adenylate cyclase -0.32
    10 Psest_0556 Curlin associated repeat. -0.32
    11 Psest_4123 Site-specific recombinase XerD -0.31
    12 Psest_0049 Uncharacterized conserved protein -0.31
    13 Psest_2874 Predicted acyltransferases -0.31
    14 Psest_0278 hypothetical protein -0.30
    15 Psest_0808 prepilin-type N-terminal cleavage/methylation domain -0.30
    16 Psest_2426 PAS domain S-box -0.30
    17 Psest_0250 Glycosyltransferases, probably involved in cell wall biogenesis -0.30
    18 Psest_2882 hypothetical protein -0.30
    19 Psest_0168 Uncharacterized conserved protein -0.30
    20 Psest_0249 UDP-N-acetylglucosamine 2-epimerase -0.29

    Or look for positive cofitness