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  • Negative cofitness for Psest_0876 from Pseudomonas stutzeri RCH2

    Type III restriction enzyme, res subunit./Type I restriction enzyme R protein N terminus (HSDR_N).
    SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
    KEGG: type I restriction enzyme, R subunit

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_2387 FolB domain -0.32
    2 Psest_3876 Predicted permease -0.30
    3 Psest_3086 hypothetical protein -0.30
    4 Psest_2169 malto-oligosyltrehalose synthase -0.28
    5 Psest_0345 Uncharacterized protein conserved in archaea -0.28
    6 Psest_1356 Predicted periplasmic protein -0.28
    7 Psest_1560 hypothetical protein -0.26
    8 Psest_1359 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases -0.26
    9 Psest_2882 hypothetical protein -0.25
    10 Psest_1352 Predicted membrane protein -0.25
    11 Psest_3788 xanthine phosphoribosyltransferase -0.24
    12 Psest_2465 hypothetical protein -0.24
    13 Psest_3003 Transcriptional regulator -0.24
    14 Psest_2362 Zn-dependent hydrolases, including glyoxylases -0.23
    15 Psest_2922 Lhr-like helicases -0.23
    16 Psest_1545 Anaerobic dehydrogenases, typically selenocysteine-containing -0.23
    17 Psest_0359 Transcriptional regulators -0.23
    18 Psest_2997 Long-chain fatty acid transport protein -0.23
    19 Psest_0231 phosphoesterase, MJ0936 family -0.23
    20 Psest_4347 PAS domain S-box -0.23

    Or look for positive cofitness