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  • Negative cofitness for Psest_0691 from Pseudomonas stutzeri RCH2

    ribonuclease R
    SEED: 3'-to-5' exoribonuclease RNase R
    KEGG: ribonuclease R

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain -0.37
    2 Psest_2900 hypothetical protein -0.36
    3 Psest_3068 hypothetical protein -0.35
    4 Psest_3975 Signal transduction histidine kinase -0.34
    5 Psest_2702 PAS domain S-box -0.34
    6 Psest_2551 1-aminocyclopropane-1-carboxylate deaminase -0.33
    7 Psest_3976 PAS domain S-box -0.33
    8 Psest_2441 hypothetical protein -0.33
    9 Psest_0247 NAD-dependent aldehyde dehydrogenases -0.32
    10 Psest_0056 Glutathione S-transferase -0.31
    11 Psest_3974 Anti-sigma regulatory factor (Ser/Thr protein kinase) -0.31
    12 Psest_3216 diguanylate cyclase (GGDEF) domain -0.31
    13 Psest_1407 RecA-superfamily ATPases implicated in signal transduction -0.30
    14 Psest_1335 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) -0.30
    15 Psest_1840 Undecaprenyl-phosphate glucose phosphotransferase -0.30
    16 Psest_1537 Bacterioferritin-associated ferredoxin -0.30
    17 Psest_3217 PAS domain S-box -0.30
    18 Psest_3688 1-acyl-sn-glycerol-3-phosphate acyltransferase -0.30
    19 Psest_1377 hypothetical protein -0.30
    20 Psest_1659 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit -0.30

    Or look for positive cofitness