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  • Negative cofitness for Psest_4133 from Pseudomonas stutzeri RCH2

    RNA polymerase sigma factor, sigma-70 family
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_1481 Predicted membrane protein -0.33
    2 Psest_3916 hypothetical protein -0.30
    3 Psest_4046 hypothetical protein -0.29
    4 Psest_4215 hypothetical protein -0.28
    5 Psest_4191 Transcriptional regulator -0.27
    6 Psest_3918 hypothetical protein -0.27
    7 Psest_4017 hypothetical protein -0.27
    8 Psest_4175 Flagellar motor switch/type III secretory pathway protein -0.27
    9 Psest_1096 hypothetical protein -0.27
    10 Psest_1850 Protein of unknown function (DUF2937). -0.26
    11 Psest_3107 uracil-DNA glycosylase -0.26
    12 Psest_0120 hypothetical protein -0.25
    13 Psest_1097 hypothetical protein -0.25
    14 Psest_0880 NADPH:quinone reductase and related Zn-dependent oxidoreductases -0.24
    15 Psest_1098 Restriction endonuclease S subunits -0.24
    16 Psest_4016 Integrase -0.24
    17 Psest_1514 Glycine cleavage system regulatory protein -0.24
    18 Psest_1771 hypothetical protein -0.24
    19 Psest_0081 hypothetical protein -0.24
    20 Psest_0947 Phage integrase family. -0.23

    Or look for positive cofitness