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  • Negative cofitness for Psest_3456 from Pseudomonas stutzeri RCH2

    RNA polymerase sigma factor, sigma-70 family
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_0296 glutathione synthetase, prokaryotic -0.27
    2 Psest_3431 Phage integrase family. -0.23
    3 Psest_0621 Protein-disulfide isomerase -0.23
    4 Psest_3575 Arabinose efflux permease -0.22
    5 Psest_3998 glutamate--cysteine ligase -0.21
    6 Psest_2407 nitrite reductase [NAD(P)H], small subunit -0.20
    7 Psest_0624 hypothetical protein -0.20
    8 Psest_0086 hypothetical protein -0.19
    9 Psest_0612 outer membrane porin, OprD family. -0.19
    10 Psest_3430 hypothetical protein -0.19
    11 Psest_0130 Uncharacterized conserved protein -0.19
    12 Psest_4046 hypothetical protein -0.19
    13 Psest_4111 hypothetical protein -0.19
    14 Psest_4017 hypothetical protein -0.19
    15 Psest_1041 Predicted membrane protein -0.19
    16 Psest_0423 hypothetical protein -0.18
    17 Psest_4125 Glycine cleavage system H protein (lipoate-binding) -0.18
    18 Psest_0916 Phage integrase family. -0.18
    19 Psest_0297 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain -0.18
    20 Psest_0760 Polyketide cyclase / dehydrase and lipid transport. -0.18

    Or look for positive cofitness