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  • Negative cofitness for Psest_3287 from Pseudomonas stutzeri RCH2

    Type II secretory pathway, component PulF
    SEED: Type IV fimbrial assembly protein PilC
    KEGG: type IV pilus assembly protein PilC

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_0311 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family -0.37
    2 Psest_4140 Acyl-CoA dehydrogenases -0.34
    3 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family -0.33
    4 Psest_2017 Predicted acyltransferase -0.30
    5 Psest_0487 Uncharacterized protein conserved in bacteria -0.30
    6 Psest_2555 hypothetical protein -0.28
    7 Psest_2140 Cation/multidrug efflux pump -0.27
    8 Psest_3882 Opacity protein and related surface antigens -0.27
    9 Psest_4139 PAS domain S-box -0.27
    10 Psest_0309 RND family efflux transporter, MFP subunit -0.26
    11 Psest_2141 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family -0.26
    12 Psest_4008 PAS domain S-box -0.26
    13 Psest_0181 glycine cleavage system T protein -0.25
    14 Psest_0514 lytic murein transglycosylase B -0.25
    15 Psest_3332 K+-dependent Na+/Ca+ exchanger related-protein -0.25
    16 Psest_0515 rare lipoprotein A -0.25
    17 Psest_1700 Transcriptional regulator -0.24
    18 Psest_4229 Transcriptional regulator -0.24
    19 Psest_0717 Protein of unknown function (DUF1631). -0.23
    20 Psest_0418 diguanylate cyclase (GGDEF) domain -0.23

    Or look for positive cofitness