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  • Negative cofitness for Psest_3224 from Pseudomonas stutzeri RCH2

    16S RNA G1207 methylase RsmC
    SEED: Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)
    KEGG: ribosomal RNA small subunit methyltransferase C

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_3578 Catalase -0.34
    2 Psest_1481 Predicted membrane protein -0.34
    3 Psest_2775 Glycerol-3-phosphate dehydrogenase -0.28
    4 Psest_0620 Putative protein-S-isoprenylcysteine methyltransferase -0.27
    5 Psest_2308 Predicted Fe-S protein -0.26
    6 Psest_2596 hypothetical protein -0.26
    7 Psest_2011 Predicted permease -0.26
    8 Psest_0596 heavy metal efflux pump (cobalt-zinc-cadmium) -0.24
    9 Psest_2636 tryptophan synthase, beta subunit -0.24
    10 Psest_2136 Predicted homoserine dehydrogenase -0.24
    11 Psest_1949 Predicted N6-adenine-specific DNA methylase -0.23
    12 Psest_3165 diguanylate cyclase (GGDEF) domain -0.23
    13 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family -0.23
    14 Psest_3435 hypothetical protein -0.22
    15 Psest_3172 cation diffusion facilitator family transporter -0.22
    16 Psest_4286 Glutamine synthetase -0.22
    17 Psest_2017 Predicted acyltransferase -0.21
    18 Psest_1512 Predicted permease -0.21
    19 Psest_0431 Lactate dehydrogenase and related dehydrogenases -0.21
    20 Psest_1315 hypothetical protein -0.21

    Or look for positive cofitness