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  • Negative cofitness for Psest_3140 from Pseudomonas stutzeri RCH2

    NTP pyrophosphohydrolases including oxidative damage repair enzymes
    SEED: Hypothetical nudix hydrolase YeaB

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_1055 Saccharopine dehydrogenase and related proteins -0.53
    2 Psest_1054 Diaminopimelate decarboxylase -0.51
    3 Psest_3213 acetate kinase -0.44
    4 Psest_3214 phosphate acetyltransferase -0.43
    5 Psest_0541 succinate CoA transferases -0.36
    6 Psest_0559 Sortase and related acyltransferases -0.36
    7 Psest_1248 RNA methyltransferase, TrmH family, group 1 -0.35
    8 Psest_4082 hypothetical protein -0.35
    9 Psest_1948 Ribosome modulation factor -0.35
    10 Psest_1249 serine O-acetyltransferase -0.34
    11 Psest_3375 prepilin-type N-terminal cleavage/methylation domain -0.32
    12 Psest_0767 diguanylate cyclase (GGDEF) domain -0.29
    13 Psest_1144 AmpG-related permease -0.29
    14 Psest_2875 DNA mismatch repair protein MutS -0.28
    15 Psest_0731 Serine/threonine protein kinase involved in cell cycle control -0.28
    16 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase -0.27
    17 Psest_0170 5,10-methenyltetrahydrofolate synthetase -0.26
    18 Psest_0681 DNA mismatch repair protein MutL -0.26
    19 Psest_1013 phosphoribosylamine--glycine ligase -0.25
    20 Psest_1037 acetolactate synthase, small subunit -0.25

    Or look for positive cofitness