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  • Negative cofitness for Psest_3052 from Pseudomonas stutzeri RCH2

    Site-specific recombinase XerD
    SEED: putative integrase

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_2692 catechol 1,2-dioxygenase, proteobacterial -0.24
    2 Psest_1398 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component -0.23
    3 Psest_0684 GTP-binding protein HflX -0.22
    4 Psest_3578 Catalase -0.22
    5 Psest_1203 Permeases -0.22
    6 Psest_2017 Predicted acyltransferase -0.21
    7 Psest_4012 TRAP-type mannitol/chloroaromatic compound transport system, small permease component -0.21
    8 Psest_0319 Predicted ferric reductase -0.21
    9 Psest_1376 hypothetical protein -0.20
    10 Psest_3450 Permeases -0.20
    11 Psest_2011 Predicted permease -0.20
    12 Psest_3888 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit -0.20
    13 Psest_1855 cysteine synthase A -0.19
    14 Psest_1842 Chemotaxis signal transduction protein -0.19
    15 Psest_3775 Mg chelatase-related protein -0.19
    16 Psest_0542 AMP nucleosidase -0.18
    17 Psest_3235 Protein of unknown function (DUF1329). -0.18
    18 Psest_3477 Signal transduction histidine kinase -0.18
    19 Psest_4023 hypothetical protein -0.18
    20 Psest_3510 Na+-dependent transporters of the SNF family -0.18

    Or look for positive cofitness