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  • Negative cofitness for Psest_2661 from Pseudomonas stutzeri RCH2

    Isopropylmalate/homocitrate/citramalate synthases
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
    KEGG: hydroxymethylglutaryl-CoA lyase

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_0438 NACHT domain. -0.36
    2 Psest_0931 putative quinone oxidoreductase, YhdH/YhfP family -0.32
    3 Psest_3393 hypothetical protein -0.30
    4 Psest_1476 Predicted permease -0.30
    5 Psest_2294 nitrite reductase, copper-containing -0.28
    6 Psest_2289 Nitric oxide reductase activation protein -0.28
    7 Psest_2811 Uncharacterized conserved protein -0.28
    8 Psest_3423 Site-specific recombinase XerC -0.27
    9 Psest_1478 Predicted membrane protein -0.27
    10 Psest_0932 Transcriptional regulator -0.27
    11 Psest_0711 ATP-dependent chaperone ClpB -0.27
    12 Psest_2273 coenzyme PQQ biosynthesis protein B -0.26
    13 Psest_2267 PAS domain S-box -0.26
    14 Psest_0928 Gluconolactonase -0.26
    15 Psest_3577 Predicted carboxypeptidase -0.26
    16 Psest_1664 Glycerophosphoryl diester phosphodiesterase -0.25
    17 Psest_2817 Transcriptional regulator -0.25
    18 Psest_0431 Lactate dehydrogenase and related dehydrogenases -0.25
    19 Psest_0949 Site-specific recombinase XerD -0.25
    20 Psest_2552 hypothetical protein -0.24

    Or look for positive cofitness