Negative cofitness for Psest_2179 from Pseudomonas stutzeri RCH2

DNA ligase D
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
KEGG: DNA ligase (ATP)

Computing cofitness values with 424 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	Psest_3174		mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-0.34
2	Psest_0438		NACHT domain.	-0.34
3	Psest_1513		Peroxiredoxin	-0.32
4	Psest_0903		luciferase-type oxidoreductase, BA3436 family	-0.32
5	Psest_0606		Predicted hydrolase (HAD superfamily)	-0.32
6	Psest_0271		ornithine carbamoyltransferase	-0.31
7	Psest_3137		phosphoribosylglycinamide formyltransferase 2	-0.31
8	Psest_3142		Uncharacterized protein conserved in bacteria	-0.30
9	Psest_2626		Flp pilus assembly protein CpaB	-0.30
10	Psest_3407		Type I site-specific restriction-modification system, R (restriction) subunit and related helicases	-0.29
11	Psest_3423		Site-specific recombinase XerC	-0.29
12	Psest_2739		Transcriptional regulator	-0.29
13	Psest_2692		catechol 1,2-dioxygenase, proteobacterial	-0.29
14	Psest_1819		Nucleoside-diphosphate-sugar epimerases	-0.28
15	Psest_2811		Uncharacterized conserved protein	-0.28
16	Psest_2717		Succinylglutamate desuccinylase	-0.28
17	Psest_3403		Putative protein-S-isoprenylcysteine methyltransferase	-0.27
18	Psest_0931		putative quinone oxidoreductase, YhdH/YhfP family	-0.27
19	Psest_4014		hypothetical protein	-0.27
20	Psest_3425		Sortase and related acyltransferases	-0.26

Or look for positive cofitness