Negative cofitness for PGA1_c20660 from Phaeobacter inhibens DSM 17395

TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data)
Original annotation: TRAP transporter, subunit DctM
SEED: TRAP-type C4-dicarboxylate transport system, large permease component

Computing cofitness values with 282 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	PGA1_c00420		metallo-beta-lactamase-like protein	-0.25
2	PGA1_262p01880		mandelate racemase/ muconate lactonizing enzyme-like protein	-0.24
3	PGA1_c30360		protein RpsU	-0.22
4	PGA1_c27280		signal transduction histidine kinase	-0.22
5	PGA1_c02180		dihydrolipoyl dehydrogenase LpdA	-0.21
6	PGA1_c33660		hypothetical protein	-0.20
7	PGA1_c34470		UDP-glucose 4-epimerase ExoB	-0.19
8	PGA1_c11580		octopine permease ATP-binding protein P	-0.19
9	PGA1_c23940		putative serine-glyoxylate aminotransferase	-0.19
10	PGA1_c24650		NADPH-dependent FMN reductases	-0.19
11	PGA1_c31660		transporter, MFS family	-0.18
12	PGA1_c25410		putative transcriptional regulator, LysR family	-0.17
13	PGA1_262p01970		putative transcriptional regulator, TetR family	-0.17
14	PGA1_c36200		Uncharacterized protein conserved in bacteria	-0.17
15	PGA1_c01270		Hypoxia induced protein conserved region.	-0.17
16	PGA1_c06210		probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A	-0.17
17	PGA1_c29350		alkaline protease secretion ATP-binding protein AprD	-0.17
18	PGA1_c19550		Uncharacterized conserved protein	-0.17
19	PGA1_c12990		Peptidase propeptide and YPEB domain.	-0.16
20	PGA1_262p01290		transcriptional regulator, AraC family	-0.16

Or look for positive cofitness