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  • Negative cofitness for Psest_0202 from Pseudomonas stutzeri RCH2

    diguanylate cyclase (GGDEF) domain
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    KEGG: diguanylate cyclase

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_2441 hypothetical protein -0.34
    2 Psest_0233 hypothetical protein -0.33
    3 Psest_0056 Glutathione S-transferase -0.33
    4 Psest_0166 NADPH:quinone reductase and related Zn-dependent oxidoreductases -0.32
    5 Psest_3966 Predicted thioesterase -0.31
    6 Psest_3976 PAS domain S-box -0.31
    7 Psest_3068 hypothetical protein -0.31
    8 Psest_0899 Excinuclease ATPase subunit -0.31
    9 Psest_1135 Protein of unknown function (DUF3182). -0.30
    10 Psest_0343 hypothetical membrane protein, TIGR01666 -0.29
    11 Psest_0562 magnesium-translocating P-type ATPase -0.29
    12 Psest_2563 Arabinose efflux permease -0.28
    13 Psest_1024 ABC-type Fe3+-siderophore transport system, permease component -0.28
    14 Psest_2900 hypothetical protein -0.27
    15 Psest_3472 Long-chain acyl-CoA synthetases (AMP-forming) -0.27
    16 Psest_0232 Predicted dehydrogenase -0.27
    17 Psest_0142 Micrococcal nuclease (thermonuclease) homologs -0.27
    18 Psest_3235 Protein of unknown function (DUF1329). -0.27
    19 Psest_0351 hypothetical protein -0.27
    20 Psest_0247 NAD-dependent aldehyde dehydrogenases -0.27

    Or look for positive cofitness