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  • Negative cofitness for Psest_2014 from Pseudomonas stutzeri RCH2

    Isocitrate lyase (EC 4.1.3.1) (from data)
    Original annotation: Isocitrate lyase
    SEED: Isocitrate lyase (EC 4.1.3.1)
    KEGG: isocitrate lyase

    Computing cofitness values with 424 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psest_0418 diguanylate cyclase (GGDEF) domain -0.41
    2 Psest_1700 Transcriptional regulator -0.38
    3 Psest_2645 Transcriptional regulator -0.34
    4 Psest_2072 Methyltransferase domain. -0.32
    5 Psest_1569 PAS domain S-box/diguanylate cyclase (GGDEF) domain -0.24
    6 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type -0.24
    7 Psest_2614 Predicted glycosyltransferases -0.23
    8 Psest_4229 Transcriptional regulator -0.22
    9 Psest_2223 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases -0.21
    10 Psest_0953 iron-sulfur cluster-binding protein -0.18
    11 Psest_2487 uncharacterized domain 1 -0.18
    12 Psest_3370 prepilin-type N-terminal cleavage/methylation domain -0.18
    13 Psest_3970 Transcriptional regulator -0.18
    14 Psest_0954 Fe-S oxidoreductase -0.18
    15 Psest_2604 WbqC-like protein family. -0.18
    16 Psest_2609 Glycosyltransferase -0.18
    17 Psest_0299 Chemotaxis signal transduction protein -0.18
    18 Psest_4140 Acyl-CoA dehydrogenases -0.18
    19 Psest_0952 Uncharacterized conserved protein -0.17
    20 Psest_4139 PAS domain S-box -0.17

    Or look for positive cofitness