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  • Negative cofitness for CSW01_19480 from Vibrio cholerae E7946 ATCC 55056

    HlyD family type I secretion periplasmic adaptor subunit
    SEED: Type I secretion system, membrane fusion protein LapC

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_19005 amino acid ABC transporter substrate-binding protein -0.49
    2 CSW01_15685 toxin -0.48
    3 CSW01_00465 twin-arginine translocase subunit TatB -0.48
    4 CSW01_14915 ribosome alternative rescue factor ArfA -0.46
    5 CSW01_00350 thiamine biosynthesis protein ThiS -0.45
    6 CSW01_00050 amino acid ABC transporter substrate-binding protein -0.44
    7 CSW01_00295 hypothetical protein -0.43
    8 CSW01_17555 LacI family transcriptional regulator -0.43
    9 CSW01_13510 HslU--HslV peptidase ATPase subunit -0.43
    10 CSW01_03995 hypothetical protein -0.42
    11 CSW01_08515 trimethylamine N-oxide reductase system protein TorE -0.42
    12 CSW01_03645 PilZ domain-containing protein -0.42
    13 CSW01_15265 N-acetyltransferase -0.41
    14 CSW01_05810 transporter -0.41
    15 CSW01_04300 toxin coregulated pilus biosynthesis protein T -0.40
    16 CSW01_18550 non-hemolytic enterotoxin lytic component L1 -0.40
    17 CSW01_14100 hypothetical protein -0.40
    18 CSW01_14910 cold-shock protein -0.40
    19 CSW01_04770 hemolysin -0.39
    20 CSW01_17270 isoprenoid biosynthesis protein ElbB -0.39

    Or look for positive cofitness