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  • Negative cofitness for CSW01_18930 from Vibrio cholerae E7946 ATCC 55056

    alpha-ketoglutarate-dependent dioxygenase AlkB
    SEED: Alkylated DNA repair protein AlkB

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17200 DUF333 domain-containing protein -0.69
    2 CSW01_07085 carboxypeptidase M32 -0.63
    3 CSW01_07625 sulfurtransferase FdhD -0.61
    4 CSW01_10195 hypothetical protein -0.61
    5 CSW01_00470 twin-arginine translocase subunit TatC -0.60
    6 CSW01_00870 cytochrome c5 family protein -0.60
    7 CSW01_00460 twin-arginine translocase subunit TatA -0.60
    8 CSW01_09180 quinolinate synthase -0.60
    9 CSW01_09815 TetR/AcrR family transcriptional regulator -0.59
    10 CSW01_19050 phosphoenolpyruvate synthase -0.59
    11 CSW01_03070 hemolysin -0.59
    12 CSW01_09150 AraC family transcriptional regulator -0.58
    13 CSW01_05295 low molecular weight phosphotyrosine protein phosphatase -0.58
    14 CSW01_13285 ribulose-phosphate 3-epimerase -0.58
    15 CSW01_17745 diacylglycerol kinase -0.57
    16 CSW01_01555 ATP-dependent RNA helicase RhlB -0.57
    17 CSW01_13675 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase -0.57
    18 CSW01_05925 tryptophan synthase subunit alpha -0.57
    19 CSW01_00510 chorismate lyase -0.57
    20 CSW01_02490 glutathione synthetase -0.57

    Or look for positive cofitness