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  • Negative cofitness for CSW01_18890 from Vibrio cholerae E7946 ATCC 55056

    peptidyl-prolyl cis-trans isomerase
    SEED: Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8)
    KEGG: peptidyl-prolyl cis-trans isomerase C

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03170 ATP-dependent helicase HrpB -0.69
    2 CSW01_02840 DNA mismatch repair protein MutS -0.68
    3 CSW01_19095 DUF445 domain-containing protein -0.68
    4 CSW01_10725 hypothetical protein -0.67
    5 CSW01_06635 transporter -0.65
    6 CSW01_01390 mannose-6-phosphate isomerase, class I -0.65
    7 CSW01_08100 homoserine O-succinyltransferase -0.65
    8 CSW01_19545 chemotaxis protein CheW -0.65
    9 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -0.64
    10 CSW01_09675 CDP-alcohol phosphatidyltransferase family protein -0.64
    11 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD -0.64
    12 CSW01_05465 CPBP family intramembrane metalloprotease -0.64
    13 CSW01_06925 hypothetical protein -0.64
    14 CSW01_09965 DUF2989 domain-containing protein -0.64
    15 CSW01_06305 methyl-accepting chemotaxis protein -0.63
    16 CSW01_10325 protein phosphatase CheZ -0.63
    17 CSW01_17140 urease -0.63
    18 CSW01_02085 UTP--glucose-1-phosphate uridylyltransferase -0.63
    19 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO -0.63
    20 CSW01_09970 peptide-methionine (R)-S-oxide reductase -0.63

    Or look for positive cofitness