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  • Negative cofitness for CSW01_18780 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
    SEED: 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)
    KEGG: RNA methyltransferase, TrmA family

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_07085 carboxypeptidase M32 -0.78
    2 CSW01_10020 ROK family protein -0.77
    3 CSW01_17495 glycerol-3-phosphate dehydrogenase -0.75
    4 CSW01_04040 ABC transporter ATP-binding protein -0.75
    5 CSW01_06400 DUF1513 domain-containing protein -0.74
    6 CSW01_17095 protein acetyltransferase -0.74
    7 CSW01_01865 hypothetical protein -0.73
    8 CSW01_05730 inosine/guanosine kinase -0.73
    9 CSW01_06395 iron-regulated protein A -0.73
    10 CSW01_03205 iron ABC transporter substrate-binding protein -0.73
    11 CSW01_01820 N-acetylmuramoyl-L-alanine amidase -0.72
    12 CSW01_07135 chromosome partitioning protein ParA -0.72
    13 CSW01_16855 CAI-1 autoinducer synthase -0.72
    14 CSW01_02005 hypothetical protein -0.72
    15 CSW01_06450 histidine kinase -0.71
    16 CSW01_05455 MFS transporter -0.71
    17 CSW01_16850 hybrid sensor histidine kinase/response regulator -0.71
    18 CSW01_11920 NupC/NupG family nucleoside CNT transporter -0.71
    19 CSW01_14990 hypothetical protein -0.70
    20 CSW01_17300 molybdopterin-synthase adenylyltransferase MoeB -0.70

    Or look for positive cofitness