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  • Negative cofitness for CSW01_18670 from Vibrio cholerae E7946 ATCC 55056

    CdaR family transcriptional regulator
    SEED: Sugar diacid utilization regulator SdaR
    KEGG: carbohydrate diacid regulator

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10220 DNA topoisomerase III -0.62
    2 CSW01_13615 GGDEF domain-containing protein -0.60
    3 CSW01_03220 phosphonomutase -0.59
    4 CSW01_07920 lipid A modification system glycine carrier protein AlmF -0.56
    5 CSW01_12270 prepilin-type cleavage/methylation domain-containing protein -0.56
    6 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO -0.55
    7 CSW01_17090 SPOR domain-containing protein -0.53
    8 CSW01_13630 type II secretion protein -0.53
    9 CSW01_02710 chemotaxis protein -0.51
    10 CSW01_07965 LysR family transcriptional regulator -0.51
    11 CSW01_10150 SulP family inorganic anion transporter -0.51
    12 CSW01_07510 hypothetical protein -0.51
    13 CSW01_13470 transcriptional regulator -0.51
    14 CSW01_01730 acetyltransferase -0.51
    15 CSW01_08195 ABC transporter ATP-binding protein -0.50
    16 CSW01_13270 ABC transporter substrate-binding protein -0.50
    17 CSW01_07155 spermidine/putrescine ABC transporter permease PotB -0.49
    18 CSW01_18645 MBL fold metallo-hydrolase -0.49
    19 CSW01_06945 hypothetical protein -0.49
    20 CSW01_08885 hypothetical protein -0.48

    Or look for positive cofitness