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  • Negative cofitness for CSW01_18455 from Vibrio cholerae E7946 ATCC 55056

    hemagglutinin/proteinase
    SEED: Vibriolysin, extracellular zinc protease (EC 3.4.24.25) @ Pseudolysin, extracellular zinc protease (EC 3.4.24.26)
    KEGG: vibriolysin

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_19385 tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY -0.61
    2 CSW01_04790 TetR family transcriptional regulator -0.59
    3 CSW01_03420 MarR family transcriptional regulator -0.51
    4 CSW01_04795 polysaccharide biosynthesis/export family protein -0.50
    5 CSW01_14605 type VI secretion system-associated protein TagO -0.49
    6 CSW01_08300 response regulator -0.47
    7 CSW01_14200 arginase -0.47
    8 CSW01_06510 glucan biosynthesis protein G -0.46
    9 CSW01_15560 lipocalin -0.44
    10 CSW01_04270 toxin coregulated pilus biosynthesis protein B -0.44
    11 CSW01_18695 energy transducer TonB -0.43
    12 CSW01_11605 ATP-dependent zinc protease -0.43
    13 CSW01_00110 hypothetical protein -0.42
    14 CSW01_16030 DUF3709 domain-containing protein -0.42
    15 CSW01_10740 peptidase M15 -0.41
    16 CSW01_08960 DNA repair protein RadC -0.41
    17 CSW01_00545 TatD family deoxyribonuclease -0.40
    18 CSW01_16900 twin-arginine translocase TatA/TatE family subunit -0.40
    19 CSW01_02715 transcriptional antiterminator -0.40
    20 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -0.40

    Or look for positive cofitness