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  • Negative cofitness for CSW01_18185 from Vibrio cholerae E7946 ATCC 55056

    DEAD/DEAH box family ATP-dependent RNA helicase
    SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
    KEGG: ATP-dependent RNA helicase DeaD

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18945 LysR family transcriptional regulator -0.58
    2 CSW01_06045 lipoprotein -0.56
    3 CSW01_01215 capsular biosynthesis protein -0.54
    4 CSW01_17090 SPOR domain-containing protein -0.54
    5 CSW01_09690 acyl-CoA thioesterase -0.54
    6 CSW01_14790 hypothetical protein -0.51
    7 CSW01_09080 transcriptional regulator -0.50
    8 CSW01_06865 Cof-type HAD-IIB family hydrolase -0.50
    9 CSW01_09160 mannose-6-phosphate isomerase, class I -0.49
    10 CSW01_09930 ATP-dependent DNA helicase -0.49
    11 CSW01_11700 hypothetical protein -0.49
    12 CSW01_17005 sensor domain-containing diguanylate cyclase -0.49
    13 CSW01_03190 hypothetical protein -0.49
    14 CSW01_11615 deacylase -0.48
    15 CSW01_08815 AcrB/AcrD/AcrF family protein -0.48
    16 CSW01_09635 sigma-54-dependent Fis family transcriptional regulator -0.47
    17 CSW01_01340 RfbT protein -0.47
    18 CSW01_03220 phosphonomutase -0.46
    19 CSW01_07160 spermidine/putrescine ABC transporter ATP-binding protein -0.45
    20 CSW01_18125 integrase -0.45

    Or look for positive cofitness