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  • Negative cofitness for CSW01_18150 from Vibrio cholerae E7946 ATCC 55056

    transcription initiation factor TFIIIB
    SEED: COG1405: Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_05755 histidinol-phosphate transaminase -0.80
    2 CSW01_11270 non-ribosomal peptide synthetase -0.73
    3 CSW01_06740 2-methylcitrate synthase -0.73
    4 CSW01_09630 sensor histidine kinase -0.72
    5 CSW01_01095 N-acetylmuramic acid 6-phosphate etherase -0.71
    6 CSW01_11275 NADPH-dependent ferric siderophore reductase -0.71
    7 CSW01_13495 MATE family efflux transporter -0.69
    8 CSW01_05465 CPBP family intramembrane metalloprotease -0.69
    9 CSW01_10390 ferrous iron transport protein A -0.69
    10 CSW01_10770 methyl-accepting chemotaxis protein -0.69
    11 CSW01_02710 chemotaxis protein -0.69
    12 CSW01_10725 hypothetical protein -0.68
    13 CSW01_12385 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase -0.68
    14 CSW01_10325 protein phosphatase CheZ -0.67
    15 CSW01_08190 ABC transporter permease -0.66
    16 CSW01_07835 catalase-peroxidase -0.66
    17 CSW01_11710 transcriptional regulator -0.66
    18 CSW01_08235 DNA-binding response regulator -0.66
    19 CSW01_17050 histidine kinase -0.66
    20 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -0.66

    Or look for positive cofitness