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  • Negative cofitness for CSW01_17700 from Vibrio cholerae E7946 ATCC 55056

    sigma-54-dependent Fis family transcriptional regulator
    SEED: Phosphoglycerate transport system transcriptional regulatory protein PgtA
    KEGG: two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18515 DNA-binding transcriptional regulator DsdC -0.60
    2 CSW01_02470 LuxR family transcriptional regulator -0.58
    3 CSW01_14055 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -0.55
    4 CSW01_01715 NADH pyrophosphatase -0.55
    5 CSW01_09040 primosomal protein -0.54
    6 CSW01_07310 enterotoxin -0.53
    7 CSW01_04240 peptidase -0.53
    8 CSW01_06645 response regulator -0.53
    9 CSW01_12095 hypothetical protein -0.52
    10 CSW01_10140 hypothetical protein -0.52
    11 CSW01_12085 HNH endonuclease -0.51
    12 CSW01_13415 rhodanese-like domain-containing protein -0.51
    13 CSW01_15895 hypothetical protein -0.50
    14 CSW01_10695 flagellin B -0.50
    15 CSW01_09075 hypothetical protein -0.49
    16 CSW01_03970 DNA ligase -0.48
    17 CSW01_08575 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase -0.48
    18 CSW01_00575 class I SAM-dependent methyltransferase -0.48
    19 CSW01_08580 HTH-type transcriptional regulator MetR -0.48
    20 CSW01_14990 hypothetical protein -0.48

    Or look for positive cofitness