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  • Negative cofitness for CSW01_17605 from Vibrio cholerae E7946 ATCC 55056

    DNA-binding response regulator
    SEED: Transcriptional regulatory protein UhpA
    KEGG: two-component system, NarL family, uhpT operon response regulator UhpA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_06440 C4-dicarboxylate ABC transporter -0.57
    2 CSW01_14590 type IV secretion protein DotU -0.54
    3 CSW01_17635 class I poly(R)-hydroxyalkanoic acid synthase -0.53
    4 CSW01_14140 type VI secretion system tip protein VgrG -0.52
    5 CSW01_13000 peptidylprolyl isomerase -0.52
    6 CSW01_19525 chemoreceptor glutamine deamidase CheD -0.51
    7 CSW01_04740 capsule biosynthesis protein CapK -0.49
    8 CSW01_17670 hypothetical protein -0.47
    9 CSW01_08300 response regulator -0.47
    10 CSW01_07070 HlyD family secretion protein -0.46
    11 CSW01_08645 two-component system response regulator TorR -0.44
    12 CSW01_00130 oxidoreductase -0.44
    13 CSW01_03420 MarR family transcriptional regulator -0.44
    14 CSW01_05920 dicarboxylate/amino acid:cation symporter -0.44
    15 CSW01_16030 DUF3709 domain-containing protein -0.43
    16 CSW01_13185 peptidylprolyl isomerase -0.43
    17 CSW01_15700 hypothetical protein -0.43
    18 CSW01_17350 AbrB family transcriptional regulator -0.43
    19 CSW01_09015 hypothetical protein -0.42
    20 CSW01_09725 TauD/TfdA family dioxygenase -0.42

    Or look for positive cofitness