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  • Negative cofitness for CSW01_17180 from Vibrio cholerae E7946 ATCC 55056

    peptide ABC transporter permease
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_04075 4,5-dioxygenase -0.51
    2 CSW01_08215 Bcr/CflA family drug resistance efflux transporter -0.50
    3 CSW01_02680 WYL domain-containing protein -0.50
    4 CSW01_08915 ABC transporter permease -0.49
    5 CSW01_04520 aminobenzoyl-glutamate transporter -0.48
    6 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase -0.48
    7 CSW01_04980 NfeD family protein -0.47
    8 CSW01_10215 histone deacetylase -0.46
    9 CSW01_08980 hypothetical protein -0.46
    10 CSW01_19565 ABC transporter substrate-binding protein -0.45
    11 CSW01_05110 bacteriocin production protein -0.44
    12 CSW01_18280 L-2,4-diaminobutyric acid acetyltransferase -0.44
    13 CSW01_13550 O-succinylhomoserine (thiol)-lyase -0.44
    14 CSW01_02940 oxaloacetate decarboxylase subunit gamma -0.43
    15 CSW01_17295 molybdopterin molybdotransferase -0.43
    16 CSW01_13835 ATPase -0.42
    17 CSW01_18485 cytochrome d terminal oxidase subunit 1 -0.42
    18 CSW01_18590 LysR family transcriptional regulator -0.42
    19 CSW01_10795 NAD(P)H:quinone oxidoreductase -0.42
    20 CSW01_02815 tRNA pseudouridine(13) synthase TruD -0.42

    Or look for positive cofitness