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  • Negative cofitness for CSW01_17170 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter ATP-binding protein
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: microcin C transport system ATP-binding protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_11880 hypothetical protein -0.61
    2 CSW01_06000 GGDEF domain-containing protein -0.60
    3 CSW01_15535 NUDIX hydrolase -0.59
    4 CSW01_16450 sulfate transporter subunit -0.58
    5 CSW01_15685 toxin -0.57
    6 CSW01_17745 diacylglycerol kinase -0.57
    7 CSW01_04235 hypothetical protein -0.56
    8 CSW01_00510 chorismate lyase -0.54
    9 CSW01_08015 ABC transporter substrate-binding protein -0.53
    10 CSW01_07435 hypothetical protein -0.52
    11 CSW01_04185 nuclease -0.51
    12 CSW01_09735 LysR family transcriptional regulator -0.50
    13 CSW01_10075 endolytic transglycosylase MltG -0.50
    14 CSW01_04320 type 4 prepilin-like proteins leader peptide-processing enzyme -0.50
    15 CSW01_01220 capsular biosynthesis protein -0.50
    16 CSW01_03240 chitobiase -0.49
    17 CSW01_04275 toxin coregulated pilus biosynthesis protein Q -0.49
    18 CSW01_15895 hypothetical protein -0.49
    19 CSW01_02730 diguanylate phosphodiesterase -0.48
    20 CSW01_02005 hypothetical protein -0.48

    Or look for positive cofitness