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  • Negative cofitness for CSW01_17115 from Vibrio cholerae E7946 ATCC 55056

    SgrR family transcriptional regulator
    SEED: SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA
    KEGG: SgrR family transcriptional regulator

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18845 maltose ABC transporter permease -0.63
    2 CSW01_01110 YicC family protein -0.50
    3 CSW01_04090 sensor histidine kinase -0.48
    4 CSW01_05515 two-component sensor histidine kinase -0.46
    5 CSW01_08360 ABC transporter substrate-binding protein -0.46
    6 CSW01_18450 hypothetical protein -0.46
    7 CSW01_07895 class II fumarate hydratase -0.46
    8 CSW01_17775 guanylate cyclase -0.45
    9 CSW01_14410 sodium-independent anion transporter -0.45
    10 CSW01_01155 DNA repair protein RadC -0.45
    11 CSW01_05355 DUF454 domain-containing protein -0.45
    12 CSW01_12905 outer membrane protein assembly factor -0.44
    13 CSW01_14605 type VI secretion system-associated protein TagO -0.42
    14 CSW01_17175 ABC transporter permease -0.42
    15 CSW01_09790 septum site-determining protein MinD -0.41
    16 CSW01_07100 DUF4123 domain-containing protein -0.41
    17 CSW01_14545 sel1 repeat family protein -0.41
    18 CSW01_14925 hypothetical protein -0.40
    19 CSW01_03115 SulP family inorganic anion transporter -0.40
    20 CSW01_09055 DUF2787 domain-containing protein -0.40

    Or look for positive cofitness