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  • Negative cofitness for CSW01_15350 from Vibrio cholerae E7946 ATCC 55056

    glycine cleavage system aminomethyltransferase T
    SEED: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
    KEGG: aminomethyltransferase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17760 DNA helicase IV -0.60
    2 CSW01_02835 RNA polymerase sigma factor RpoS -0.59
    3 CSW01_09630 sensor histidine kinase -0.58
    4 CSW01_12925 DUF2796 domain-containing protein -0.56
    5 CSW01_15755 hypothetical protein -0.55
    6 CSW01_11440 ribonuclease HII -0.55
    7 CSW01_00335 phosphomethylpyrimidine synthase -0.55
    8 CSW01_11825 zinc transporter ZntB -0.54
    9 CSW01_08190 ABC transporter permease -0.53
    10 CSW01_17480 LacI family transcriptional regulator -0.53
    11 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC -0.53
    12 CSW01_11275 NADPH-dependent ferric siderophore reductase -0.53
    13 CSW01_02955 NADP-dependent oxidoreductase -0.53
    14 CSW01_10045 sodium-dependent transporter -0.53
    15 CSW01_08435 phage shock protein PspA -0.52
    16 CSW01_09260 peptidylprolyl isomerase -0.52
    17 CSW01_17410 transporter -0.52
    18 CSW01_18420 hypothetical protein -0.52
    19 CSW01_18205 dehydratase -0.51
    20 CSW01_06775 4-hydroxyphenylpyruvate dioxygenase -0.51

    Or look for positive cofitness