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  • Negative cofitness for CSW01_15115 from Vibrio cholerae E7946 ATCC 55056

    iron(III) ABC transporter permease
    SEED: Ferric vibriobactin, enterobactin transport system, permease protein VctD (TC 3.A.1.14.6)
    KEGG: iron complex transport system permease protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_01990 envelope stress response protein PspG -0.54
    2 CSW01_00430 NAD(P)/FAD-dependent oxidoreductase -0.53
    3 CSW01_11935 sodium:alanine symporter family protein -0.52
    4 CSW01_03100 TetR/AcrR family transcriptional regulator -0.52
    5 CSW01_04590 transcriptional regulator GcvA -0.51
    6 CSW01_09955 L-asparaginase 1 -0.51
    7 CSW01_10830 hypothetical protein -0.50
    8 CSW01_02060 methionine synthase -0.50
    9 CSW01_00805 RNA-binding protein -0.50
    10 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP -0.49
    11 CSW01_00690 homoserine/homoserine lactone efflux protein -0.48
    12 CSW01_04495 hypothetical protein -0.48
    13 CSW01_03670 biofilm architecture maintenance protein MbaA -0.46
    14 CSW01_17025 GGDEF domain-containing protein -0.45
    15 CSW01_03875 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -0.45
    16 CSW01_00435 EamA/RhaT family transporter -0.44
    17 CSW01_02100 RNase E specificity factor CsrD -0.42
    18 CSW01_03630 sensor histidine kinase -0.41
    19 CSW01_00575 class I SAM-dependent methyltransferase -0.41
    20 CSW01_07860 ABC transporter permease -0.40

    Or look for positive cofitness