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  • Negative cofitness for CSW01_14650 from Vibrio cholerae E7946 ATCC 55056

    ribose import ATP-binding protein RbsA
    SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
    KEGG: ribose transport system ATP-binding protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_04555 tRNA pseudouridine(65) synthase TruC -0.49
    2 CSW01_00645 DUF484 domain-containing protein -0.49
    3 CSW01_12480 sigma-E factor negative regulatory protein RseA -0.48
    4 CSW01_05905 DUF72 domain-containing protein -0.47
    5 CSW01_00245 DNA-protecting protein DprA -0.46
    6 CSW01_01800 tRNA-Met -0.46
    7 CSW01_14915 ribosome alternative rescue factor ArfA -0.46
    8 CSW01_13280 phosphoglycolate phosphatase -0.45
    9 CSW01_06515 methyl-accepting chemotaxis protein -0.45
    10 CSW01_13660 VUT family protein -0.44
    11 CSW01_04870 ribosome silencing factor -0.44
    12 CSW01_11635 DNA polymerase IV -0.43
    13 CSW01_06285 vitamin B12 ABC transporter permease BtuC -0.43
    14 CSW01_06060 FAD-binding oxidoreductase -0.43
    15 CSW01_13385 acetylornithine deacetylase -0.42
    16 CSW01_08320 EamA/RhaT family transporter -0.42
    17 CSW01_07940 DUF2309 domain-containing protein -0.41
    18 CSW01_13265 nuclease -0.41
    19 CSW01_11995 DUF3293 domain-containing protein -0.40
    20 CSW01_09130 PTS fructose transporter subunit IIC -0.40

    Or look for positive cofitness