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  • Negative cofitness for CSW01_14645 from Vibrio cholerae E7946 ATCC 55056

    D-ribose pyranase
    SEED: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
    KEGG: D-ribose pyranase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18440 long-chain fatty acid transporter -0.54
    2 CSW01_12750 BolA family transcriptional regulator -0.53
    3 CSW01_08085 ABC transporter permease -0.53
    4 CSW01_00430 NAD(P)/FAD-dependent oxidoreductase -0.48
    5 CSW01_05865 ATPase -0.47
    6 CSW01_02690 DUF2787 domain-containing protein -0.46
    7 CSW01_10185 histidine kinase -0.46
    8 CSW01_11835 tRNA-binding protein -0.45
    9 CSW01_00965 cyclic AMP-GMP synthase -0.45
    10 CSW01_11065 terminase -0.44
    11 CSW01_07630 ABC-F family ATPase -0.44
    12 CSW01_10965 phage tail protein -0.44
    13 CSW01_07930 LysR family transcriptional regulator -0.44
    14 CSW01_10540 NAD(P)H-dependent oxidoreductase -0.43
    15 CSW01_09735 LysR family transcriptional regulator -0.42
    16 CSW01_13845 hypothetical protein -0.42
    17 CSW01_18090 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 -0.41
    18 CSW01_03790 phosphate ABC transporter, permease protein PstA -0.41
    19 CSW01_02880 regulatory protein RecX -0.41
    20 CSW01_06620 EamA family transporter -0.40

    Or look for positive cofitness