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  • Negative cofitness for CSW01_14615 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system membrane subunit TssM
    SEED: IcmF-related protein
    KEGG: type VI secretion system protein ImpL

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_01025 LysE family translocator -0.70
    2 CSW01_12380 general secretion pathway protein GspA -0.61
    3 CSW01_09635 sigma-54-dependent Fis family transcriptional regulator -0.60
    4 CSW01_08525 formate transporter FocA -0.57
    5 CSW01_03435 protease -0.57
    6 CSW01_11580 sigma factor-binding protein Crl -0.57
    7 CSW01_09730 hypothetical protein -0.56
    8 CSW01_08665 DNA transformation protein -0.55
    9 CSW01_13210 TIGR02444 family protein -0.54
    10 CSW01_07635 two-component sensor histidine kinase -0.53
    11 CSW01_00235 peptide deformylase -0.53
    12 CSW01_02555 amino acid transporter -0.53
    13 CSW01_07820 RidA family protein -0.53
    14 CSW01_02655 type II secretion system protein -0.53
    15 CSW01_11615 deacylase -0.52
    16 CSW01_10820 bifunctional UDP-sugar hydrolase/5'-nucleotidase -0.52
    17 CSW01_00280 shikimate dehydrogenase -0.51
    18 CSW01_00205 hemolysin III family protein -0.51
    19 CSW01_02860 sulfate ABC transporter permease subunit CysW -0.51
    20 CSW01_02660 high-affinity zinc uptake system protein ZnuA precursor -0.50

    Or look for positive cofitness