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  • Negative cofitness for CSW01_14610 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system protein TssA
    SEED: Uncharacterized protein ImpA
    KEGG: type VI secretion system protein VasJ

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_05000 short-chain dehydrogenase -0.58
    2 CSW01_04315 TCP pilus virulence regulatory protein -0.55
    3 CSW01_07785 ABC transporter substrate-binding protein -0.51
    4 CSW01_18710 hemin ABC transporter substrate-binding protein -0.50
    5 CSW01_00575 class I SAM-dependent methyltransferase -0.47
    6 CSW01_17155 glutathione S-transferase -0.45
    7 CSW01_09645 C4-dicarboxylate ABC transporter permease -0.44
    8 CSW01_07845 MBL fold metallo-hydrolase -0.44
    9 CSW01_01140 lipid A biosynthesis lauroyl acyltransferase -0.44
    10 CSW01_04535 N-acetyltransferase -0.44
    11 CSW01_16150 hypothetical protein -0.43
    12 CSW01_07750 hypothetical protein -0.43
    13 CSW01_12920 DUF2607 domain-containing protein -0.43
    14 CSW01_15010 ATP-dependent RNA helicase RhlE -0.43
    15 CSW01_18590 LysR family transcriptional regulator -0.42
    16 CSW01_11340 GGDEF domain-containing protein -0.42
    17 CSW01_03240 chitobiase -0.42
    18 CSW01_00735 DUF1145 domain-containing protein -0.41
    19 CSW01_19070 LysR family transcriptional regulator -0.41
    20 CSW01_06130 DNA polymerase II -0.41

    Or look for positive cofitness