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  • Negative cofitness for CSW01_14590 from Vibrio cholerae E7946 ATCC 55056

    type IV secretion protein DotU
    SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
    KEGG: type VI secretion system protein ImpK

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_00345 thiazole biosynthesis adenylyltransferase ThiF -0.58
    2 CSW01_00295 hypothetical protein -0.55
    3 CSW01_17605 DNA-binding response regulator -0.54
    4 CSW01_14910 cold-shock protein -0.54
    5 CSW01_01855 DUF2065 domain-containing protein -0.49
    6 CSW01_12880 hypothetical protein -0.48
    7 CSW01_13480 DUF805 domain-containing protein -0.48
    8 CSW01_11135 hypothetical protein -0.47
    9 CSW01_06070 serine protease -0.47
    10 CSW01_05600 ABC transporter permease -0.46
    11 CSW01_16285 acetyltransferase -0.45
    12 CSW01_04770 hemolysin -0.44
    13 CSW01_17805 molybdate ABC transporter substrate-binding protein -0.44
    14 CSW01_13510 HslU--HslV peptidase ATPase subunit -0.42
    15 CSW01_18025 ACP phosphodiesterase -0.42
    16 CSW01_05385 YcgN family cysteine cluster protein -0.41
    17 CSW01_02380 tRNA-Asn -0.41
    18 CSW01_17935 MFS transporter -0.40
    19 CSW01_10185 histidine kinase -0.40
    20 CSW01_18445 lysophospholipase VolA -0.40

    Or look for positive cofitness