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  • Negative cofitness for CSW01_14585 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system baseplate subunit TssK
    SEED: Uncharacterized protein ImpJ/VasE
    KEGG: type VI secretion system protein ImpJ

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10965 phage tail protein -0.60
    2 CSW01_13645 K+/H+ antiporter NhaP2 -0.59
    3 CSW01_07630 ABC-F family ATPase -0.54
    4 CSW01_18550 non-hemolytic enterotoxin lytic component L1 -0.53
    5 CSW01_09735 LysR family transcriptional regulator -0.51
    6 CSW01_19300 polymer-forming cytoskeletal family protein -0.47
    7 CSW01_07500 DUF2835 domain-containing protein -0.46
    8 CSW01_19110 LysE family translocator -0.46
    9 CSW01_05125 ribonuclease T -0.46
    10 CSW01_02470 LuxR family transcriptional regulator -0.45
    11 CSW01_00495 SOS-response transcriptional repressor -0.45
    12 CSW01_00385 transcriptional regulator AsnC -0.45
    13 CSW01_11835 tRNA-binding protein -0.45
    14 CSW01_02880 regulatory protein RecX -0.42
    15 CSW01_09100 cryptochrome DASH -0.41
    16 CSW01_09125 PTS fructose transporter subunit IIA -0.41
    17 CSW01_09175 YecA family protein -0.40
    18 CSW01_03115 SulP family inorganic anion transporter -0.40
    19 CSW01_00350 thiamine biosynthesis protein ThiS -0.40
    20 CSW01_11340 GGDEF domain-containing protein -0.40

    Or look for positive cofitness