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  • Negative cofitness for CSW01_14580 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system lipoprotein TssJ
    SEED: Type VI secretion lipoprotein/VasD
    KEGG: type VI secretion system protein VasD

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14280 DUF3302 domain-containing protein -0.56
    2 CSW01_02625 inovirus Gp2 family protein -0.51
    3 CSW01_00515 hypothetical protein -0.50
    4 CSW01_14885 NupC/NupG family nucleoside CNT transporter -0.50
    5 CSW01_13615 GGDEF domain-containing protein -0.49
    6 CSW01_00090 valine--pyruvate transaminase -0.49
    7 CSW01_05770 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase -0.48
    8 CSW01_09920 chromosome partitioning protein ParA -0.47
    9 CSW01_06965 lipoate--protein ligase A -0.47
    10 CSW01_14300 purine-nucleoside phosphorylase -0.45
    11 CSW01_19390 3,4-dihydroxy-2-butanone-4-phosphate synthase -0.45
    12 CSW01_11045 head protein -0.45
    13 CSW01_08885 hypothetical protein -0.45
    14 CSW01_09160 mannose-6-phosphate isomerase, class I -0.45
    15 CSW01_19305 M23 family peptidase -0.43
    16 CSW01_15670 peroxiredoxin -0.43
    17 CSW01_19130 FAA hydrolase family protein -0.43
    18 CSW01_19325 MltR family transcriptional regulator -0.42
    19 CSW01_15260 hypothetical protein -0.42
    20 CSW01_18945 LysR family transcriptional regulator -0.42

    Or look for positive cofitness