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  • Negative cofitness for CSW01_14440 from Vibrio cholerae E7946 ATCC 55056

    redox-sensitive transcriptional activator SoxR
    SEED: Redox-sensitive transcriptional activator SoxR
    KEGG: MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_11075 hypothetical protein -0.54
    2 CSW01_07940 DUF2309 domain-containing protein -0.53
    3 CSW01_03845 hypothetical protein -0.48
    4 CSW01_17785 hypothetical protein -0.48
    5 CSW01_03795 phosphate ABC transporter ATP-binding protein -0.47
    6 CSW01_02430 non-canonical purine NTP pyrophosphatase -0.47
    7 CSW01_14710 Spindolin -0.46
    8 CSW01_00440 DNA recombination protein RmuC -0.46
    9 CSW01_08545 YdcF family protein -0.46
    10 CSW01_12710 hypothetical protein -0.45
    11 CSW01_05895 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB -0.45
    12 CSW01_06655 outer membrane protein OmpV -0.45
    13 CSW01_08805 hypothetical protein -0.44
    14 CSW01_14455 hypothetical protein -0.44
    15 CSW01_01490 Fis family transcriptional regulator -0.44
    16 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM -0.43
    17 CSW01_18385 DNA-binding response regulator -0.43
    18 CSW01_09870 pyridoxal phosphate-dependent aminotransferase -0.43
    19 CSW01_11595 NCS2 family permease -0.43
    20 CSW01_12915 YtfJ family protein -0.43

    Or look for positive cofitness