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  • Negative cofitness for CSW01_13870 from Vibrio cholerae E7946 ATCC 55056

    sensor domain-containing phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18850 maltose ABC transporter permease MalF -0.51
    2 CSW01_16980 hypothetical protein -0.49
    3 CSW01_14570 type VI secretion system baseplate subunit TssG -0.47
    4 CSW01_07120 LysE family translocator -0.45
    5 CSW01_14365 methyl-accepting chemotaxis protein -0.45
    6 CSW01_14535 RluA family pseudouridine synthase -0.44
    7 CSW01_17655 protein translocase subunit SecF -0.44
    8 CSW01_03740 oxygen-insensitive NADPH nitroreductase -0.43
    9 CSW01_17570 ferredoxin-type protein NapF -0.43
    10 CSW01_18950 GGDEF domain-containing protein -0.42
    11 CSW01_14425 GGDEF domain-containing protein -0.42
    12 CSW01_14355 DUF1566 domain-containing protein -0.41
    13 CSW01_18565 L-threonine 3-dehydrogenase -0.41
    14 CSW01_15695 DUF3265 domain-containing protein -0.41
    15 CSW01_04055 alkyl/aryl-sulfatase -0.40
    16 CSW01_14805 tryptophanase -0.40
    17 CSW01_15260 hypothetical protein -0.40
    18 CSW01_17215 multidrug transporter -0.40
    19 CSW01_00080 hypothetical protein -0.40
    20 CSW01_16430 hypothetical protein -0.39

    Or look for positive cofitness