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  • Negative cofitness for CSW01_13795 from Vibrio cholerae E7946 ATCC 55056

    type II secretion system protein GspC
    SEED: General secretion pathway protein C
    KEGG: general secretion pathway protein C

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_06945 hypothetical protein -0.78
    2 CSW01_04020 vibriobactin biosynthesis amide synthase VibH -0.75
    3 CSW01_18400 outer membrane lipoprotein-sorting protein -0.73
    4 CSW01_19230 maltoporin -0.73
    5 CSW01_12975 Crp/Fnr family transcriptional regulator -0.72
    6 CSW01_07835 catalase-peroxidase -0.72
    7 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -0.72
    8 CSW01_00620 class I adenylate cyclase -0.69
    9 CSW01_01300 sugar ABC transporter -0.69
    10 CSW01_01295 ABC transporter permease -0.69
    11 CSW01_03470 peptide chain release factor 3 -0.69
    12 CSW01_18205 dehydratase -0.69
    13 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.69
    14 CSW01_02835 RNA polymerase sigma factor RpoS -0.68
    15 CSW01_14510 oxidoreductase -0.68
    16 CSW01_11270 non-ribosomal peptide synthetase -0.68
    17 CSW01_01255 acyltransferase -0.68
    18 CSW01_01350 polysaccharide biosynthesis protein -0.68
    19 CSW01_09145 PTS fructose transporter subunit IIA -0.68
    20 CSW01_01260 polysaccharide deacetylase -0.68

    Or look for positive cofitness