• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for CSW01_13605 from Vibrio cholerae E7946 ATCC 55056

    tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
    SEED: tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)
    KEGG: RNA methyltransferase, TrmH family, group 2

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_02980 HlyC/CorC family transporter -0.78
    2 CSW01_01485 transcriptional regulator -0.72
    3 CSW01_17325 transaldolase -0.71
    4 CSW01_17395 hypothetical protein -0.70
    5 CSW01_05425 hypothetical protein -0.70
    6 CSW01_05730 inosine/guanosine kinase -0.69
    7 CSW01_13165 sel1 repeat family protein -0.69
    8 CSW01_17095 protein acetyltransferase -0.68
    9 CSW01_15170 hypothetical protein -0.68
    10 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) -0.68
    11 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP -0.68
    12 CSW01_12365 inorganic phosphate transporter -0.68
    13 CSW01_10255 cytochrome c-type biogenesis protein CcmH -0.67
    14 CSW01_07625 sulfurtransferase FdhD -0.67
    15 CSW01_05490 L-threonylcarbamoyladenylate synthase -0.67
    16 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) -0.67
    17 CSW01_00685 lysophospholipase -0.67
    18 CSW01_11920 NupC/NupG family nucleoside CNT transporter -0.67
    19 CSW01_02075 ligase -0.67
    20 CSW01_16860 tellurium resistance protein -0.67

    Or look for positive cofitness