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  • Negative cofitness for CSW01_13540 from Vibrio cholerae E7946 ATCC 55056

    malate dehydrogenase
    SEED: NADP-dependent malic enzyme (EC 1.1.1.40)
    KEGG: malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_15835 LysE family translocator -0.52
    2 CSW01_10055 PTS glucose transporter subunit IIBC -0.52
    3 CSW01_18265 aspartate kinase -0.50
    4 CSW01_09855 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase -0.50
    5 CSW01_08785 DUF4056 domain-containing protein -0.50
    6 CSW01_10730 ArsC family reductase -0.49
    7 CSW01_08065 sensor histidine kinase -0.46
    8 CSW01_02235 hypothetical protein -0.46
    9 CSW01_00335 phosphomethylpyrimidine synthase -0.45
    10 CSW01_00680 Cof-type HAD-IIB family hydrolase -0.45
    11 CSW01_11155 NAD-dependent DNA ligase -0.45
    12 CSW01_06720 tripartite tricarboxylate transporter TctB family protein -0.44
    13 CSW01_12755 anti-sigma B factor antagonist -0.43
    14 CSW01_16810 aspartate/tyrosine/aromatic aminotransferase -0.43
    15 CSW01_08305 diguanylate phosphodiesterase -0.43
    16 CSW01_16575 acetyltransferase -0.43
    17 CSW01_08080 HlyD family secretion protein -0.43
    18 CSW01_08045 hypothetical protein -0.43
    19 CSW01_15290 methyl-accepting chemotaxis protein -0.42
    20 CSW01_05005 epimerase -0.42

    Or look for positive cofitness