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  • Negative cofitness for CSW01_13395 from Vibrio cholerae E7946 ATCC 55056

    PadR family transcriptional regulator
    SEED: Transcriptional regulator, PadR family
    KEGG: PadR family transcriptional regulator, regulatory protein AphA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_05565 ABC transporter ATP-binding protein -0.50
    2 CSW01_03445 SCP2 domain-containing protein -0.49
    3 CSW01_10125 maf-like protein -0.47
    4 CSW01_05995 cysteine desulfurase-like protein -0.45
    5 CSW01_14840 aerotolerance protein BatD -0.43
    6 CSW01_15425 DUF3265 domain-containing protein -0.43
    7 CSW01_12420 sensor domain-containing diguanylate cyclase -0.42
    8 CSW01_10050 hypothetical protein -0.42
    9 CSW01_04000 isochorismatase -0.42
    10 CSW01_16840 exonuclease sbcCD subunit D -0.41
    11 CSW01_01055 hypothetical protein -0.41
    12 CSW01_01525 3'-5' exonuclease -0.41
    13 CSW01_17365 DNA mismatch repair protein MutT -0.40
    14 CSW01_08860 DUF262 domain-containing protein -0.40
    15 CSW01_18950 GGDEF domain-containing protein -0.40
    16 CSW01_14145 DUF4123 domain-containing protein -0.39
    17 CSW01_19345 YccF domain-containing protein -0.39
    18 CSW01_18215 N-acetylglucosamine-binding protein GbpA -0.39
    19 CSW01_14110 HTH-type transcriptional regulator MalT -0.38
    20 CSW01_14310 DUF1722 domain-containing protein -0.38

    Or look for positive cofitness