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  • Negative cofitness for CSW01_13310 from Vibrio cholerae E7946 ATCC 55056

    type IV pilus secretin PilQ
    SEED: Type IV pilus biogenesis protein PilQ
    KEGG: type IV pilus assembly protein PilQ

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_05695 class I SAM-dependent methyltransferase -0.62
    2 CSW01_08520 hypothetical protein -0.62
    3 CSW01_18210 cryptochrome/photolyase family protein -0.62
    4 CSW01_00665 DTW domain-containing protein -0.56
    5 CSW01_17695 lysoplasmalogenase -0.55
    6 CSW01_03655 murein transglycosylase -0.54
    7 CSW01_03100 TetR/AcrR family transcriptional regulator -0.54
    8 CSW01_03970 DNA ligase -0.54
    9 CSW01_03550 transcriptional activator protein NhaR -0.53
    10 CSW01_16860 tellurium resistance protein -0.52
    11 CSW01_03555 transcriptional regulator -0.52
    12 CSW01_02090 helix-turn-helix transcriptional regulator -0.52
    13 CSW01_02215 carbon-nitrogen hydrolase family protein -0.52
    14 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase -0.52
    15 CSW01_14805 tryptophanase -0.51
    16 CSW01_00860 TetR/AcrR family transcriptional regulator -0.51
    17 CSW01_10335 RNA polymerase sigma factor FliA -0.50
    18 CSW01_00700 DNA starvation/stationary phase protection protein -0.50
    19 CSW01_00755 cell division protein FtsX -0.50
    20 CSW01_11590 xanthine phosphoribosyltransferase -0.50

    Or look for positive cofitness