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  • Negative cofitness for CSW01_13260 from Vibrio cholerae E7946 ATCC 55056

    30S ribosomal protein S12 methylthiotransferase RimO
    SEED: Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
    KEGG: ribosomal protein S12 methylthiotransferase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_08660 PurR family transcriptional regulator -0.68
    2 CSW01_17785 hypothetical protein -0.64
    3 CSW01_18890 peptidyl-prolyl cis-trans isomerase -0.63
    4 CSW01_06380 GTP cyclohydrolase II -0.63
    5 CSW01_15380 hypothetical protein -0.62
    6 CSW01_04010 vibriobactin biosynthesis isochorismate synthase -0.62
    7 CSW01_12600 3-isopropylmalate dehydrogenase -0.61
    8 CSW01_03645 PilZ domain-containing protein -0.61
    9 CSW01_06785 FAA hydrolase family protein -0.60
    10 CSW01_04150 RNA methyltransferase -0.60
    11 CSW01_11555 riboflavin synthase -0.59
    12 CSW01_05950 anthranilate synthase component I -0.58
    13 CSW01_11780 exodeoxyribonuclease V subunit beta -0.58
    14 CSW01_18505 hypothetical protein -0.58
    15 CSW01_16690 type II toxin-antitoxin system RelE/ParE family toxin -0.58
    16 CSW01_17300 molybdopterin-synthase adenylyltransferase MoeB -0.58
    17 CSW01_16035 DUF645 domain-containing protein -0.58
    18 CSW01_05925 tryptophan synthase subunit alpha -0.58
    19 CSW01_18350 cell division protein DedD -0.58
    20 CSW01_16855 CAI-1 autoinducer synthase -0.57

    Or look for positive cofitness