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  • Negative cofitness for CSW01_12995 from Vibrio cholerae E7946 ATCC 55056

    lysine transporter LysM
    SEED: Putative cell envelope opacity-associated protein A
    KEGG: hypothetical protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN -0.56
    2 CSW01_16705 hypothetical protein -0.51
    3 CSW01_03285 AI-2E family transporter -0.50
    4 CSW01_19135 MarR family transcriptional regulator -0.46
    5 CSW01_17340 23S rRNA methyltransferase -0.45
    6 CSW01_11305 copper amine oxidase -0.45
    7 CSW01_12225 pyruvate dehydrogenase complex transcriptional repressor PdhR -0.44
    8 CSW01_06675 (Na+)-NQR maturation NqrM -0.43
    9 CSW01_14640 DUF3012 domain-containing protein -0.43
    10 CSW01_06725 tripartite tricarboxylate transporter substrate-binding protein -0.42
    11 CSW01_01470 permease -0.41
    12 CSW01_14160 glutathione S-transferase -0.40
    13 CSW01_17315 DNA-binding protein -0.40
    14 CSW01_07010 chemotaxis protein CheA -0.40
    15 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA -0.40
    16 CSW01_04890 hypothetical protein -0.39
    17 CSW01_10380 iron transporter FeoC -0.39
    18 CSW01_06850 amino acid ABC transporter permease -0.39
    19 CSW01_08720 arginyltransferase -0.39
    20 CSW01_17725 TMAO reductase system sensor histidine kinase/response regulator TorS -0.38

    Or look for positive cofitness